AI4BioMedicine

Integrating genomics and AI to decode cellular systems

Bridging biology and computation to understand health and disease

Unraveling cellular mechanisms through multi-omics and machine learning

NatCom_2020_02

12/2025

Leveraging network motifs to improve artificial neural networks

NM_2025_12

12/2025

Multimodal foundation trasnformer models for multiscale genomics

ScienceAdvances_2025_10

10/2025

Uncovering the regulatory landscape of early human B cell lymphopoiesis and its implications in pathogenesis

NMI_2025_07

07/2025

Data meets prior knowledge for interpretable mechanistic inference in biology

Immunity_2025_02

02/2025

NLRP3-mediated glutaminolysis controls microglial phagocytosis to promote Alzheimer’s disease progression

NG_2024_07

07/2024

Competition shapes the landscape of X-chromosome-linked genetic diversity

Immunity_2024_02

02/2024

An atlas of cells in the human tonsil

NMI_2023_11

11/2023

Reusability report: Learning the transcriptional grammar in single-cell RNA-sequencing data using transformers

Nature_2023_09

09/2023

A second update on mapping the human genetic architecture of COVID-19

NM_2023_03

03/2023

Preclinical models for prediction of immunotherapy outcomes and immune evasion mechanisms in genetically heterogeneous multiple myeloma

NMI_2023_01

01/2023

Translating single-cell genomics into cell types

Nature_2021_07

07/2021

Mapping the human genetic architecture of COVID-19

NatCom_2020_02

02/2020

Deriving disease modules from the compressed transcriptional space embedded in a deep autoencoder

NatCom_2020_02

06/2020

Harmonization of quality metrics and power calculation in multi-omic studies

Science_2019_09

09/2019

Multiple sclerosis genomic map implicates peripheral immune cells and microglia in susceptibility

NatCom_2020_02

09/2019

Therapeutic efficacy of dimethyl fumarate in relapsing-remitting multiple sclerosis associates with ROS pathway in monocytes

PNAS_2019

02/2019

MAPK pathway and B cells overactivation in multiple sclerosis revealed by phosphoproteomics and genomic analysis

NMI_2019_01

01/2019

Causal deconvolution by algorithmic generative models